visualize ❭ cell_morphology_visualizer ❭ CellMorphologyInteractiveVisualizer ❭ _get_interactive_cell

CellMorphologyInteractiveVisualizer._get_interactive_cell

visualize.cell_morphology_visualizer.CellMorphologyInteractiveVisualizer._get_interactive_cell(color=None, time_point=None, diameter=None)

Setup plotly for rendering in notebooks. Shows an interactive 3D render of the Cell with NO data overlayed.

Parameters:

  • color (str | list) – If you want some other color overlayed on the cell morphology. Options: “voltage”, “vm”, “synapses”, “synapse”, or a color string, or a nested list of colors for each section

  • time_point (float | int) – time_point at which to plot some scalar data. Ignored when color does not refer to scalar data.

  • diameter – If the actual diameter is poorly visible, set this value to a fixed diameter.

Returns:

an interactive figure. Usually added to a ipywidgets.VBox object

Return type:

plotly.graph_objs._figure.Figure