visualize ❭ cell_morphology_visualizer ❭ CellMorphologyInteractiveVisualizer ❭ _get_interactive_dash_app

CellMorphologyInteractiveVisualizer._get_interactive_dash_app

visualize.cell_morphology_visualizer.CellMorphologyInteractiveVisualizer._get_interactive_dash_app(color, t_start, t_stop, t_step)

This is the main function to set up an interactive plot with scalar data overlayed. It fetches the scalar data of interest (usually membrane voltage, but others are possible; check with self.possible_scalars). It only fetches data for the time points specified in self.times_to_show, as only these timepoints will be plotted out.

Parameters:

  • color (str, optional) – Scalar data to overlay on interactive plot. Defaults to None.

  • background_color (str, optional) – Background color of plot. Defaults to “rgb(180,180,180)”.

  • renderer (str, optional) – Type of backend renderer to use for rendering the javascript/HTML VBox. Defaults to “notebook_connected”.

Returns:

an interactive render of the cell.

Return type:

ipywidgets.VBox object