Mockinbird
0+untagged.114.gd9c3186
What is mockinbird?
Installation
Getting started
Pipeline modules
Object reference
Notes for developers
References
Mockinbird
Docs
»
Index
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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M
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N
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P
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R
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S
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T
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U
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W
A
Annot (class in mockinbird.utils.config_validation)
B
boolean() (in module mockinbird.utils.config_validation)
C
cfg_path (mockinbird.utils.pipeline.Pipeline attribute)
cleanup() (mockinbird.utils.pipeline.CmdPipelineModule method)
(mockinbird.utils.pipeline.Pipeline method)
CmdPipelineModule (class in mockinbird.utils.pipeline)
comma_sep_args() (in module mockinbird.utils.config_validation)
config_req (mockinbird.utils.pipeline.CmdPipelineModule attribute)
converter (mockinbird.utils.config_validation.Annot attribute)
D
default (mockinbird.utils.config_validation.Annot attribute)
default_config_keys (mockinbird.utils.pipeline.CmdPipelineModule attribute)
dnanuc_validator() (in module mockinbird.utils.config_validation)
dnastr_validator() (in module mockinbird.utils.config_validation)
E
execute() (mockinbird.utils.pipeline.CmdPipelineModule method)
F
file_r_validator() (in module mockinbird.utils.config_validation)
file_rw_validator() (in module mockinbird.utils.config_validation)
G
get_config() (mockinbird.utils.pipeline.Pipeline method)
get_curfile() (mockinbird.utils.pipeline.Pipeline method)
H
has_curfile() (mockinbird.utils.pipeline.Pipeline method)
I
id_converter() (in module mockinbird.utils.config_validation)
in_set_validator() (in module mockinbird.utils.config_validation)
is_subset_validator() (in module mockinbird.utils.config_validation)
M
mockinbird.utils.config_validation (module)
module_info (mockinbird.utils.pipeline.CmdPipelineModule attribute)
N
nonneg_integer() (in module mockinbird.utils.config_validation)
P
Pipeline (class in mockinbird.utils.pipeline)
prepare() (mockinbird.utils.pipeline.CmdPipelineModule method)
R
rel_file_r_validator() (in module mockinbird.utils.config_validation)
rel_file_rw_validator() (in module mockinbird.utils.config_validation)
rel_genome_validator() (in module mockinbird.utils.config_validation)
rel_mapindex_validator() (in module mockinbird.utils.config_validation)
S
schedule() (mockinbird.utils.pipeline.Pipeline method)
T
type (mockinbird.utils.config_validation.Annot attribute)
U
upd_curfile() (mockinbird.utils.pipeline.Pipeline method)
W
warn_if_missing (mockinbird.utils.config_validation.Annot attribute)