List of references

Gene structure / Transcription / Translation / Post-translation

de Hoon, M. J., Makita, Y., Nakai, K., and Miyano, S. 2005. Prediction of transcriptional terminators in Bacillus subtilis and related species. PloS Comput. Biol. 1: e25.

Washio, T., Sasayama, J., and Tomita, M. 1998. Analysis of complete genomes suggests that many prokaryotes do not rely on hairpin formation in transcription termination. Nucl. Acids Res. 26: 5456-5463.

 

Benders, G. A., Powell, B. C., and Hutchison III, C. A. 2005. Transcriptional analysis of the conserved ftsZ gene cluster in Mycoplasma genitalium and Mycoplasma pneumoniae. J. Bacteriol. 187: 4542-4551.

Bornberg-Bauer, E., and Weiner, J. 2002. A putative transcription factor inducing mobility in Mycoplasma pneumoniae. Microbiology 148: 3764-3765.

Chang, L. J., Chen, W. H., Minion, F. C., and Shiuan, D. 2008. Mycoplasmas regulate the expression of heat-shock protein genes through CIRCE-HrcA interactions. Biochem. Biophys. Res. Comm. 367: 213-218.

Duffy, M. F., Walker, I. D., and Browning, G. F. 1997. The immunoreactive 116 kDa surface protein of Mycoplasma pneumoniae is encoded in an operon. Microbiology 143: 3391-3402.

Halbedel, S., Eilers, H., Jonas, B., et al. 2007. Transcription in Mycoplasma pneumoniae: analysis of the promoters of the ackA and ldh genes. J. Mol. Biol. 371: 596-607.

Hyman, H. C., Gafny, R., Glaser, G., and Razin, S. 1988. Promoter of the Mycoplasma pneumoniae rRNA operon. J. Bacteriol. 170: 3262-3268.

Madsen, M. L., Nettleton, D., Thacker, E. L., et al. 2006. Transcriptional profiling of Mycoplasma hyopneumoniae during heat shock using microarrays. Infect. Immun. 74: 160-166.

Madsen, M. L., Puttamreddy, S., Thacker, E. L., et al. 2008. Transcriptome changes in Mycoplasma hyopneumoniae during infection. Infect. Immun. 76: 658-663.

Musatovova, O., Dhandayuthapani, S., and Baseman, J. B. 2003. Transcriptional starts for cytadherence-related operons of Mycoplasma genitalium. FEMS Microbiol. Lett. 229: 73-81.

Musatovova, O., Dhandayuthapani, S., and Baseman, J. B. 2006. Transcriptional heat-shock response in the smallest known self-replicating cell, Mycoplasma genitalium. J. Bacteriol. 188: 2845-2855.

Waldo, R. H. III., Popham, P. L., Romero-Arroyo, C. E., et al. 1999. Transcriptional analysis of the hmw gene cluster of Mycoplasma pneumoniae. J. Bacteriol. 181: 4978-4985.

Weiner III, J., Zimmerman, C. U., Göhlmann, H. W., and Herrmann, R. 2003. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucl. Acids Res. 31: 6306-6320.

Weiner III, J., Herrmann, R., and Browning, G. F. 2000. Transcription in Mycoplasma pneumoniae. Nucl. Acids Res. 28: 4488-4496.

 

Bendtsen, J. D., Kiemer, L., Fausbol, A., and Brunak, S. 2005. Non-classical protein secretion in bacteria. BMC Microbiol. 5:58.

Inamine, J. M., Ho, K. C., Loechel, S., and Hu, P. C. 1990. Evidence that UGA is read as tryptophan codon rather than as a stop codon by Mycoplasma pneumoniae, Mycoplasma genitalium, and Mycoplasma gallisepticum. J. Bacteriol. 172: 504-506.

Jukes, T. H., Osawa, S., Muto, A., and Lehman, N. 1987. Evolution of anticodons: variations in the genetic code. Cold. Spring. Harb. Symp. Quant. Biol. 52: 769-776.

Simoneau, P., Li, C.-M., Loechel, S., et al. 1993. Codon reading scheme in Mycoplasma pneumoniae revealed by the analysis of the complete set of tRNA genes. Nucl. Acids Res. 21: 4967-4974.

Yamao, F., Muto, A., Kawauchi, Y., et al. 1985. UGA is read as tryptophan in Mycoplasma capricolum. Proc. Natl. Acad. Sci. USA 82: 2306-2309.