Publications

The publications listed here are a selection of publications of the authors. More publications can be found at the Chair for Practical Computer Science / Graphics Systems and in Gerhard Buck-Sorlin's list.

2010

Katarína Smolenová, Gerhard Buck-Sorlin, Reinhard Hemmerling, Winfried Kurth. Extension of a functional-structural model of barley for modelling of carbon and nitrogen partitioning. In: T. DeJong, D. Da Silva (eds.), Proceedings of the 6th International Workshop on Functional-Structural Plant Models (FSPM10), Davis, September 12-17, 2010, University of California 2010, 27-29.

Reinhard Hemmerling, Jochem B. Evers, Winfried Kurth. Easy specification of differential equations describing biological processes, exemplified for plant hormone dynamics. In: T. DeJong, D. Da Silva (eds.), Proceedings of the 6th International Workshop on Functional-Structural Plant Models (FSPM10), Davis, September 12-17, 2010, University of California 2010, 158-160.

Gerhard Buck-Sorlin, Pieter H. B. de Visser, Michael Henke, Benno Burema, Ep Heuvelink, Leo F. M. Marcelis, Gerie W. A. M. van der Heijden, Jan Vos. SIMPLER: An FSPM coupling Shoot production, human Interaction with the structure, Morphogenesis, Photosynthesis and Light Environment in cut-Rose. In: T. DeJong, D. Da Silva (eds.), Proceedings of the 6th International Workshop on Functional-Structural Plant Models (FSPM10), Davis, September 12-17, 2010, University of California 2010, 222-224.

Reinhard Hemmerling, Katarína Smolenová, Winfried Kurth. A programming language tailored to the specification and solution of differential equations describing processes on networks. In: Adrian-Horia Dediu, Henning Fernau, Carlos Martín-Vide (eds.), Language and Automata Theory and Applications. 4th International Conference, LATA 2010, Trier, May 24-28, 2010, Lecture Notes in Computer Science 6031, Springer, Berlin etc. 2010, 297-308.

Lifeng Xu, Michael Henke, Jun Zhu, Winfried Kurth, Gerhard H. Buck-Sorlin. A rule-based functional-structural model of rice considering source and sink functions. In: B. Li, M. Jaeger, Y. Guo (eds.), The Third International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications (PMA 09), Beijing, November 9-13, 2009, IEEE, Los Alamitos 2010, 245-252.

Gerhard H. Buck-Sorlin, Reinhard Hemmerling, Jan Vos, Pieter H. B. de Visser. Modelling of spatial light distribution in the greenhouse: Description of the model. In: B. Li, M. Jaeger, Y. Guo (eds.), The Third International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications (PMA 09), Beijing, November 9-13, 2009, IEEE, Los Alamitos 2010, 79-86.

2008

Reinhard Hemmerling, Ole Kniemeyer, Dirk Lanwert, Winfried Kurth, Gerhard Buck-Sorlin. The rule-based language XL and the modelling environment GroIMP illustrated with simulated tree competition. In: Functional Plant Biology, 35 (2008), 739–750.

Winfried Kurth. Specification of morphological models with L-systems and Relational Growth Grammars. In: Image – Journal of Interdisciplinary Image Science, Vol. 5 / Special Issue (2008).

Gerhard Buck-Sorlin, Reinhard Hemmerling, Ole Kniemeyer, Benno Burema, Winfried Kurth. A rule-based model of barley morphogenesis, with special respect to shading and Gibberellic acid signal transduction. In: Annals of Botany, 101 (8) (2008), 1109–1123.

Ole Kniemeyer, Winfried Kurth. The modelling platform GroIMP and the programming language XL. In: Applications of Graph Transformations with Industrial Relevance AGTIVE ’07 (eds.: A. Schürr, M. Nagl, A. Zündorf), International Workshop Kassel, Oct. 10-12, 2007, Lecture Notes in Computer Science 5088, Springer, Berlin etc., 2008, 570–572.

Gerhard Buck-Sorlin, Ole Kniemeyer, Winfried Kurth. A model of poplar (Populus sp.) physiology and morphology based on Relational Growth Grammars. In: Mathematical Modeling of Biological Systems, Vol. II. Proceedings of ECMTB05 (Dresden, 18.-22. 7. 2005), Eds.: A. Deutsch, R. Bravo de la Parra, R. J. de Boer, O. Diekmann, P. Jagers, E. Kisdi, M. Kretzschmar, P. Lansky, H. Metz. Birkhäuser, Boston / Basel / Berlin 2008, 313–322.

2007

Ole Kniemeyer, Günter Barczik, Reinhard Hemmerling, Winfried Kurth. Relational Growth Grammars – a parallel graph transformation approach with applications in biology and architecture. In: Applications of Graph Transformations with Industrial Relevance AGTIVE ’07 (eds.: A. Schürr, M. Nagl, A. Zündorf), International Workshop Kassel, Oct. 10-12, 2007, Lecture Notes in Computer Science 5088, Springer, Berlin etc., 2008, 152–167.

Ole Kniemeyer, Gerhard Buck-Sorlin, Winfried Kurth. GroIMP as a platform for functional-structural modelling of plants. In: Functional-Structural Plant Modelling in Crop Production (eds.: J. Vos, L. F. M. Marcelis, P. H. B. deVisser, P. C. Struik, J. B. Evers). Proceedings of a workshop held in Wageningen (NL), 5.-8. 3. 2006. Springer, Berlin 2007, 43–52.

Gerhard Buck-Sorlin, Ole Kniemeyer, Winfried Kurth. A grammar-based model of barley including virtual breeding, genetic control and a hormonal metabolic network. In: Functional-Structural Plant Modelling in Crop Production (eds.: J. Vos, L. F. M. Marcelis, P. H. B. deVisser, P. C. Struik, J. B. Evers). Proceedings of a workshop held in Wageningen (NL), 5.-8. 3. 2006. Springer, Berlin 2007, 243–252.

2006

Gerhard Buck-Sorlin, Ole Kniemeyer, Winfried Kurth. Physiologie und Morphologie der Pappel (Populus sp.) modelliert mit Relationalen Wachstumsgrammatiken. In: U. Wunn (eds.), DVFFA Sektion Forstliche Biometrie und Informatik, 17. Tagung, Freiburg, 26.-28. 9. 2005. Die Grüne Reihe (ISSN 1860-4064), 1-11.

Winfried Kurth, Gerhard Buck-Sorlin, Ole Kniemeyer. Relationale Wachstumsgrammatiken: Ein Formalismus zur Spezifikation multiskalierter Struktur-Funktions-Modelle von Pflanzen. In: Modellierung pflanzlicher Systeme aus historischer und aktueller Sicht. Symposium zu Ehren von Prof. Dr. Dr. h.c. Eilhard Alfred Mitscherlich, Schriftenreihe des Landesamtes für Verbraucherschutz, Landwirtschaft und Flurneuordnung Brandenburg, Reihe Landwirtschaft, Band 7 (2006), 36-45.

Download: [pdf, 529.4 kB]

Gerhard Buck-Sorlin, Reinhard Hemmerling, Ole Kniemeyer, Benno Burema, Winfried Kurth. New rule-based modelling methods for radiation and object avoidance in virtual plant canopies. In: Proceedings of the Second International Symposium on Plant Growth Modeling, Simulation and Visualization, Beijing, November 13-17, 2006.

Winfried Kurth, Gerhard Buck-Sorlin, Ole Kniemeyer. Relationale Wachstumsgrammatiken: Ein Formalismus zur Spezifikation multiskalierter Struktur-Funktions-Modelle von Pflanzen. In: Modellierung pflanzlicher Systeme aus historischer und aktueller Sicht. Symposium zu Ehren von Prof. Dr. Dr. h.c. Eilhard Alfred Mitscherlich, Schriftenreihe des Landesamtes für Verbraucherschutz, Landwirtschaft und Flurneuordnung Brandenburg, Reihe Landwirtschaft, Band 7 (2006), S. 36–45.

2005

Gerhard Buck-Sorlin, Ole Kniemeyer, Winfried Kurth. Barley morphology, genetics and hormonal regulation of internode elongation modelled by a Relational Growth Grammar. New Phytologist, 166 (2005), 859-867.

Winfried Kurth, Ole Kniemeyer, Gerhard Buck-Sorlin. Relational Growth Grammars - A Graph Rewriting Approach to Dynamical Systems with a Dynamical Structure. In: J.-P. Banatre, P. Fradet, J.-L. Giavitto, O. Michel (eds.), Unconventional Programming Paradigms. International Workshop UPP2004, Le Mont Saint Michel, France, September 15-17, 2004, Revised Selected and Invited Papers, Lecture Notes in Computer Science, Vol. 3566, Springer Verlag, Berlin, Heidelberg (2005), 56-72.

2004

Ole Kniemeyer. Rule-based modelling with the XL/GroIMP software. In: Harald Schaub, Frank Detje, Ulrike Brüggemann (eds.), The Logic of Artificial Life. Proceedings of 6th GWAL, Bamberg April 14-16, 2004, AKA Akademische Verlagsgesellschaft Berlin (2004), 56-65.

Download: [pdf, 549.5 kB] [ps.gz, 334.4 kB]

Ole Kniemeyer, Gerhard Buck-Sorlin, Winfried Kurth. A graph grammar approach to Artificial Life. Artificial Life, 10 (2004), 413-431.

2003

Ole Kniemeyer, Gerhard Buck-Sorlin, Winfried Kurth. Representation of genotype and phenotype in a coherent framework based on extended L-systems. In: Wolfgang Banzhaf, Thomas Christaller, Peter Dittrich, Jan T. Kim, Jens Ziegler (eds.), Advances in Artificial Life - Proceedings of the 7th European Conference on Artificial Life (ECAL), Lecture Notes in Artificial Intelligence, Vol. 2801, Springer Verlag, Berlin, Heidelberg (2003), 625-634.

Download: [pdf, 173.9 kB] © Springer-Verlag

2000

Winfried Kurth. Towards universality of growth grammars: Models of Bell, Pagès, and Takenaka revisited. Annals of Forest Science, 57 (2000), 543-554.

Download: [pdf, 176.9 kB]

1998

Winfried Kurth. Some new formalisms for modelling the interactions between plant architecture, competition and carbon allocation. Bayreuther Forum Ökologie, 52 (1998), 53-98.

Download: [ps.gz, 450.8 kB]

1994

Winfried Kurth. Growth Grammar Interpreter GROGRA 2.4: A software tool for the 3-dimensional interpretation of stochastic, sensitive growth grammars in the context of plant modelling. Introduction and Reference Manual. Berichte des Forschungszentrums Waldökosysteme der Universität Göttingen, Ser. B, Vol. 38 (1994).

Download: [ps.gz, 971.4 kB]

2008

Ole Kniemeyer. Design and Implementation of a Graph Grammar Based Language for Functional-Structural Plant Modelling, Dissertation, Technische Universität Cottbus, 2008.

Download: [pdf, 13.48 MB]

2004

Ole Kniemeyer. Rule-based modelling with the XL/GroIMP software, Presentation at the "6th German Workshop on Artificial Life" (GWAL6), Bamberg (Germany), 14-16 April 2004.

Download: [pdf, 373.4 kB] [ps.gz, 200.3 kB]

Ole Kniemeyer. Demonstration of the GroIMP software, Presentation at the "4th International Workshop on Functional-Structural Plant Models" (FSPM04), Montpellier (France), 07-11 June 2004.

Download: [pdf, 581.4 kB]

2010

Katarína Smolenová, Reinhard Hemmerling, Winfried Kurth. Towards the reconstruction of historical gardens and parks using the techniques of FSPM. Poster on the "6th International Workshop on Functional-Structural Plant Modelling" (FSPM10), Davis (Cal., USA), 12.-17. 9. 2010.

Download: [pdf, 7.31 MB]

Michael Henke, Gerhard Buck-Sorlin, Winfried Kurth. FSPM-P: A general FSPM prototype model for application in crop modelling. Poster on the "6th International Workshop on Functional-Structural Plant Modelling" (FSPM10), Davis (Cal., USA), 12.-17. 9. 2010.

Download: [pdf, 128.6 kB]

Gerhard Buck-Sorlin, Vaia Sarlikioti, Reinhard Hemmerling, Pieter H. B. de Visser. Comparison of two different light models using a virtual tomato crop. Poster on the "6th International Workshop on Functional-Structural Plant Modelling" (FSPM10), Davis (Cal., USA), 12.-17. 9. 2010.

2004

Gerhard Buck-Sorlin, Ole Kniemeyer, Winfried Kurth. Integrated grammar representation of genes, metabolites and morphology: The example of hordeomorphs, Poster on the "4th International Workshop on Functional-Structural Plant Models" (FSPM04), Montpellier (France), 07-11 June 2004.

Download: [pdf, 960.8 kB]